USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: H2A1_HUMAN USC-OGP 2-DE database:  H2A1_HUMAN H2A1_HUMAN General information about the entry View entry in simple text format Entry name H2A1_HUMAN Primary accession number P0C0S8 Secondary accession number(s) P02261 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2A type 1; Short=H2A.1; AltName: Full=Histone H2A/p;. Gene name Name=HIST1H2AG Synonyms=H2AFP    and Name=HIST1H2AI Synonyms=H2AFC    and Name=HIST1H2AK Synonyms=H2AFD    and Name=HIST1H2AL Synonyms=H2AFI    and Name=HIST1H2AM Synonyms=H2AFN Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1333: pI=4.59; Mw=16158 SPOT OGP-1335: pI=5.02; Mw=16085 SPOT OGP-1336: pI=5.13; Mw=15865 SPOT OGP-1338: pI=5.68; Mw=15649 Cross-references UniProtKB/Swiss-Prot P0C0S8; H2A1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2A1_HUMAN Primary accession number P0C0S8 Secondary accession number(s) P02261 Q2M1R2 Q76PA6 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 126) Name and origin of the protein Description RecName: Full=Histone H2A type 1; Short=H2A.1; AltName: Full=Histone H2A/p; Gene name Name=HIST1H2AG Synonyms=H2AFP    and Name=HIST1H2AI Synonyms=H2AFC    and Name=HIST1H2AK Synonyms=H2AFD    and Name=HIST1H2AL Synonyms=H2AFI    and Name=HIST1H2AM Synonyms=H2AFN Encoded on Name=HIST1H2AG; Synonyms=H2AFP; and Name=HIST1H2AI; Synonyms=H2AFC; and Name=HIST1H2AK; Synonyms=H2AFD; and Name=HIST1H2AL; Synonyms=H2AFI; and Name=HIST1H2AM; Synonyms=H2AFN Keywords 3D-structure; Acetylation; Chromosome; Citrullination; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Z83742; CAB06037.1; -; Genomic_DNA EMBL Z83739; CAB06034.1; -; Genomic_DNA EMBL X83549; CAA58539.1; -; Genomic_DNA EMBL X57138; CAA40417.1; -; Genomic_DNA EMBL L19778; AAC24466.1; -; mRNA EMBL AY131987; AAN59968.1; -; Genomic_DNA EMBL AY131989; AAN59970.1; -; Genomic_DNA EMBL AY131991; AAN59972.1; -; Genomic_DNA EMBL AY131992; AAN59973.1; -; Genomic_DNA EMBL AY131993; AAN59974.1; -; Genomic_DNA EMBL Z98744; CAB11417.1; -; Genomic_DNA EMBL Z98744; CAD24073.1; -; Genomic_DNA EMBL Z98744; CAD24077.1; -; Genomic_DNA EMBL AL009179; CAA15669.1; -; Genomic_DNA EMBL AL021807; CAA16948.1; -; Genomic_DNA EMBL BC016677; AAH16677.1; -; mRNA EMBL BC069306; AAH69306.1; -; mRNA EMBL BC104199; AAI04200.1; -; mRNA EMBL BC104198; AAI04199.1; -; mRNA EMBL BC105129; AAI05130.1; -; mRNA EMBL BC112072; AAI12073.1; -; mRNA EMBL BC112254; AAI12255.1; -; mRNA EMBL BC112256; AAI12257.1; -; mRNA CCDS CCDS4619.1; -; . CCDS CCDS4626.1; -; . CCDS CCDS4632.1; -; . CCDS CCDS4634.1; -; . CCDS CCDS4639.1; -; . PIR B56624; HSHUA1; . RefSeq NP_003500.1; NM_003509.2; . RefSeq NP_003501.1; NM_003510.2; . RefSeq NP_003502.1; NM_003511.2; . RefSeq NP_003505.1; NM_003514.2; . RefSeq NP_066408.1; NM_021064.4; . UniGene Hs.134999; -; . UniGene Hs.233568; -; . UniGene Hs.51011; -; . UniGene Hs.534035; -; . UniGene Hs.734717; -; . PDB 4QYL; X-ray; 1.80 A; E/F/G/H=2-13 PDB 5KGF; EM; 4.54 A; C/G=1-130 PDBsum 4QYL; -; . PDBsum 5KGF; -; . ProteinModelPortal P0C0S8; -; . SMR P0C0S8; -; . BioGrid 113925; 10; . BioGrid 113926; 12; . BioGrid 113928; 10; . BioGrid 113932; 12; . BioGrid 114459; 39; . DIP DIP-39638N; -; . IntAct P0C0S8; 22; . MINT MINT-1519720; -; . STRING 9606.ENSP00000352627; -; . iPTMnet P0C0S8; -; . PhosphoSitePlus P0C0S8; -; . SwissPalm P0C0S8; -; . BioMuta HIST1H2AG; -; . DMDM 83288406; -; . EPD P0C0S8; -; . MaxQB P0C0S8; -; . PaxDb P0C0S8; -; . PeptideAtlas P0C0S8; -; . PRIDE P0C0S8; -; . TopDownProteomics P0C0S8; -; . DNASU 8329; -; . DNASU 8330; -; . DNASU 8332; -; . DNASU 8969; -; . Ensembl ENST00000358739; ENSP00000351589; ENSG00000196747; . Ensembl ENST00000359193; ENSP00000352119; ENSG00000196787; . Ensembl ENST00000359611; ENSP00000352627; ENSG00000278677; . Ensembl ENST00000613174; ENSP00000482538; ENSG00000276903; . Ensembl ENST00000618958; ENSP00000482431; ENSG00000275221; . GeneID 8329; -; . GeneID 8330; -; . GeneID 8332; -; . GeneID 8336; -; . GeneID 8969; -; . KEGG hsa:8329; -; . KEGG hsa:8330; -; . KEGG hsa:8332; -; . KEGG hsa:8336; -; . KEGG hsa:8969; -; . UCSC uc003niw.4; human; . CTD 8329; -; . CTD 8330; -; . CTD 8332; -; . CTD 8336; -; . CTD 8969; -; . DisGeNET 8332; -; . DisGeNET 8969; -; . GeneCards HIST1H2AG; -; . GeneCards HIST1H2AI; -; . GeneCards HIST1H2AK; -; . GeneCards HIST1H2AL; -; . GeneCards HIST1H2AM; -; . H-InvDB HIX0200889; -; . HGNC HGNC:4737; HIST1H2AG; . HGNC HGNC:4725; HIST1H2AI; . HGNC HGNC:4726; HIST1H2AK; . HGNC HGNC:4730; HIST1H2AL; . HGNC HGNC:4735; HIST1H2AM; . HPA HPA041189; -; . MIM 602787; gene; . MIM 602788; gene; . MIM 602793; gene; . MIM 602796; gene; . MIM 615012; gene; . neXtProt NX_P0C0S8; -; . OpenTargets ENSG00000196747; -; . OpenTargets ENSG00000196787; -; . OpenTargets ENSG00000275221; -; . OpenTargets ENSG00000276903; -; . OpenTargets ENSG00000278677; -; . PharmGKB PA29114; -; . eggNOG KOG1756; Eukaryota; . eggNOG COG5262; LUCA; . GeneTree ENSGT00760000118934; -; . GeneTree ENSGT00860000133717; -; . GeneTree ENSGT00870000136488; -; . HOGENOM HOG000234652; -; . HOVERGEN HBG009342; -; . InParanoid P0C0S8; -; . KO K11251; -; . OMA GRIVPRH; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB P0C0S8; -; . TreeFam TF300137; -; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-3214858; RMTs methylate histone arginines; . Reactome R-HSA-5689603; UCH proteinases; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5689901; Metalloprotease DUBs; . SIGNOR P0C0S8; -; . ChiTaRS HIST1H2AM; human; . GeneWiki HIST1H2AG; -; . GeneWiki HIST1H2AI; -; . GeneWiki HIST1H2AK; -; . GeneWiki HIST1H2AL; -; . GeneWiki HIST1H2AM; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000184348; -; . CleanEx HS_HIST1H2AG; -; . CleanEx HS_HIST1H2AI; -; . CleanEx HS_HIST1H2AK; -; . CleanEx HS_HIST1H2AL; -; . CleanEx HS_HIST1H2AM; -; . ExpressionAtlas P0C0S8; baseline and differential; . Genevisible P0C0S8; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000790; C:nuclear chromatin; IBA:GO_Central; . GO GO:0000786; C:nucleosome; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; IBA:GO_Central; . GO GO:0019899; F:enzyme binding; IPI:UniProtKB; . GO GO:0006342; P:chromatin silencing; IBA:GO_Central; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR002119; Histone_H2A; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR032454; Histone_H2A_C; . InterPro IPR032458; Histone_H2A_CS; . Pfam PF00125; Histone; 1; . Pfam PF16211; Histone_H2A_C; 1; . PRINTS PR00620; HISTONEH2A; . SMART SM00414; H2A; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00046; HISTONE_H2A; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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